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  5. Sobic.010G138300.1

Sobic.010G138300.1


Description : Unknown function


Gene families : OG_42_0000454 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G138300.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
At1g21050 No alias Protein of unknown function, DUF617 [Source:TAIR;Acc:AT1G21050] 0.03 Orthogroups_2024-Update
Brara.D01299.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D02537.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01792.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G475994 No alias Protein of unknown function, DUF617 0.03 Orthogroups_2024-Update
Glyma.01G090700 No alias Protein of unknown function, DUF617 0.03 Orthogroups_2024-Update
Glyma.05G015000 No alias Protein of unknown function, DUF617 0.03 Orthogroups_2024-Update
Glyma.07G138800 No alias Protein of unknown function, DUF617 0.02 Orthogroups_2024-Update
Potri.005G084000 No alias Protein of unknown function, DUF617 0.03 Orthogroups_2024-Update
Potri.006G091700 No alias Protein of unknown function, DUF617 0.05 Orthogroups_2024-Update
Potri.010G131600 No alias Protein of unknown function, DUF617 0.03 Orthogroups_2024-Update
Seita.1G292500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G241200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G353300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g114390 No alias MIZU-KUSSEI-like protein (Protein of unknown function,... 0.03 Orthogroups_2024-Update
Solyc10g080060 No alias MIZU-KUSSEI-like protein (Protein of unknown function,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010274 hydrotropism IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006460 MIZ1-like_pln 139 321
No external refs found!