Sobic.010G155000.2

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.010G155000.2
Cluster	HCAA Clusters: Cluster_243

Target	Alias	Description	ECC score	Gene Family Method
At1g79580	No alias	Protein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]	0.02	Orthogroups_2024-Update
At5g66300	No alias	NAC domain-containing protein 105...	0.03	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Orthogroups_2024-Update
Bradi4g37327	No alias	NAC domain containing protein 57	0.04	Orthogroups_2024-Update
Brara.A03159.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.A03837.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00141.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B00763.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B01634.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B02909.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B03811.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C03560.1	No alias	NAC-type transcription factor	0.07	Orthogroups_2024-Update
Brara.D00978.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F02061.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03105.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01307.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H00641.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J02389.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G092465	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
GRMZM2G430522	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.02G050100	No alias	vascular related NAC-domain protein 1	0.03	Orthogroups_2024-Update
Glyma.04G078600	No alias	NAC domain containing protein 38	0.03	Orthogroups_2024-Update
HORVU2Hr1G017400.3	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os03g21030	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g01230	No alias	no apical meristem protein, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os11g03370	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g03050	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_109677g0010	No alias	(at5g61430 : 282.0) NAC domain containing protein 100...	0.03	Orthogroups_2024-Update
Mp4g22890.1	No alias	transcription factor (NAC)	0.01	Orthogroups_2024-Update
PSME_00049694-RA	No alias	(at2g18060 : 259.0) Encodes a NAC-domain transcription...	0.04	Orthogroups_2024-Update
Potri.001G396300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.013G113100	No alias	vascular related NAC-domain protein 7	0.02	Orthogroups_2024-Update
Pp1s164_37V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Pp1s70_104V6	No alias	nac domain-containing	0.03	Orthogroups_2024-Update
Seita.9G417900.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.9G564000.1	No alias	NAC-type transcription factor	0.07	Orthogroups_2024-Update
Sopen06g029400	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen08g004490	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	85

External Links

No external refs found!

Sobic.010G155000.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation