1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G155500.1

Sobic.010G155500.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G155500.1
Cluster HCAA Clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
156981 No alias O-Glycosyl hydrolases family 17 protein 0.01 Orthogroups_2024-Update
Bradi1g38755 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Brara.H01913.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.K00451.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM5G805609 No alias Glycosyl hydrolase superfamily protein 0.01 Orthogroups_2024-Update
Glyma.11G183200 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G067280.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G364600.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc06g073710 No alias Glucan endo-1,3-beta-glucosidase 14 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g071520 No alias Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A072VNE5_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 40 358
No external refs found!