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  5. Sobic.010G162900.1

Sobic.010G162900.1


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G162900.1
Cluster HCAA Clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
At4g20830 No alias Berberine bridge enzyme-like 19... 0.03 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.I01843.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I01844.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Glyma.04G113400 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.05G122000 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G134200 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Glyma.15G134300 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
LOC_Os02g14090 No alias berberine and berberine like domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_613919g0010 No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00033064-RA No alias (at4g20860 : 370.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G459100 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.001G462700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G157900 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.011G158600 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.011G160900 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Potri.011G162800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.4G178200.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Seita.4G178600.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.06 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.07 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g070120 No alias No description available 0.03 Orthogroups_2024-Update
Solyc03g006690 No alias LOW QUALITY:FAD-binding Berberine family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 461 520
IPR006094 Oxid_FAD_bind_N 77 215
No external refs found!