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  5. Sobic.010G164000.1

Sobic.010G164000.1


Description : Unknown function


Gene families : OG_42_0001621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G164000.1
Cluster HCAA Clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G225400 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G016350.3 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex 0.03 Orthogroups_2024-Update
Potri.011G106700 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 Orthogroups_2024-Update
Seita.1G024600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G102500.1 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 221 284
IPR007461 Ysc84_actin-binding 403 526
No external refs found!