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  5. Sobic.010G177400.1

Sobic.010G177400.1


Description : Unknown function


Gene families : OG_42_0007394 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G177400.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
A4A49_00438 No alias short-chain dehydrogenase tic 32, chloroplastic 0.02 Orthogroups_2024-Update
Bradi1g37175 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G095206 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Sopen04g028040 No alias short chain dehydrogenase 0.03 Orthogroups_2024-Update
Sopen04g028050 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046039 GTP metabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 44 245
No external refs found!