1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G178500.1

Sobic.010G178500.1


Description : Unknown function


Gene families : OG_42_0001682 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G178500.1
Cluster HCAA Clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
At3g24500 No alias MBF1C [Source:UniProtKB/TrEMBL;Acc:A0A178VDH9] 0.03 Orthogroups_2024-Update
Brara.G00628.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.K00234.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre02.g108450 No alias multiprotein bridging factor 1A 0.03 Orthogroups_2024-Update
GRMZM2G051135 No alias multiprotein bridging factor 1C 0.03 Orthogroups_2024-Update
LOC_Os06g39240 No alias endothelial differentiation-related factor 1, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00028837-RA No alias (at3g24500 : 197.0) One of three genes in A. thaliana... 0.04 Orthogroups_2024-Update
PSME_00031623-RA No alias (at3g24500 : 142.0) One of three genes in A. thaliana... 0.03 Orthogroups_2024-Update
Pp1s141_102V6 No alias transcriptional coactivator-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 90 141
IPR013729 MBF1_N 12 82
No external refs found!