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  5. Sobic.010G187400.1

Sobic.010G187400.1


Description : sporopollenin precursor exporter *(ABCG26) & subfamily ABCG transporter


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G187400.1

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G174800 No alias ATP-binding casette family G25 0.04 Orthogroups_2024-Update
LOC_Os06g40550 No alias ABC-2 type transporter domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G370600 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Solyc01g006720 No alias ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR) 0.02 Orthogroups_2024-Update
Solyc08g075430 No alias ABC transporter family protein (AHRD V3.3 *** U5GKR9_POPTR) 0.02 Orthogroups_2024-Update
evm.model.tig00000605.36 No alias (at3g13220 : 253.0) Encodes a ATP-binding cassette... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 394 603
IPR003439 ABC_transporter-like 92 242
No external refs found!