1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G216300.1

Sobic.010G216300.1


Description : EC_4.3 carbon-nitrogen lyase & hydroxy-tetrahydrodihydrodipicolinate synthase


Gene families : OG_42_0003299 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003299_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G216300.1
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
179125 No alias dihydrodipicolinate synthase 0.02 Orthogroups_2024-Update
At3g60880 No alias 4-hydroxy-tetrahydrodipicolinate synthase 1,... 0.04 Orthogroups_2024-Update
Bradi2g15480 No alias dihydrodipicolinate synthase 0.13 Orthogroups_2024-Update
Bradi5g18987 No alias dihydrodipicolinate synthase 0.02 Orthogroups_2024-Update
Brara.D00133.1 No alias EC_4.3 carbon-nitrogen lyase &... 0.03 Orthogroups_2024-Update
Brara.E00506.1 No alias EC_4.3 carbon-nitrogen lyase &... 0.04 Orthogroups_2024-Update
HORVU2Hr1G094420.1 No alias EC_4.3 carbon-nitrogen lyase &... 0.03 Orthogroups_2024-Update
HORVU2Hr1G113410.2 No alias EC_4.3 carbon-nitrogen lyase &... 0.11 Orthogroups_2024-Update
Pp1s23_281V6 No alias dihydrodipicolinate synthase 0.02 Orthogroups_2024-Update
Sopen03g008930 No alias Dihydrodipicolinate synthetase family 0.06 Orthogroups_2024-Update
evm.model.contig_4491.14 No alias (p26259|dapa_maize : 119.0) Dihydrodipicolinate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002220 DapA-like 84 357
No external refs found!