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  5. Sobic.010G218400.1

Sobic.010G218400.1


Description : subunit A of V-type ATPase peripheral V1 subcomplex


Gene families : OG_42_0003482 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003482_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G218400.1
Cluster HCAA Clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Potri.010G253500 No alias vacuolar ATP synthase subunit A 0.03 Orthogroups_2024-Update
Pp1s44_102V6 No alias vacuolar h+-atpase catalytic subunit 0.02 Orthogroups_2024-Update
Solyc12g055800 No alias vacuolar H+-ATPase A1 subunit isoform 0.03 Orthogroups_2024-Update
evm.model.tig00020537.2 No alias (q39291|vata_brana : 815.0) Vacuolar ATP synthase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0046034 ATP metabolic process IEA 16Dec
BP GO:1902600 proton transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 230 456
IPR004100 ATPase_F1/V1/A1_a/bsu_N 23 83
IPR031686 ATP-synth_a_Xtn 100 221
No external refs found!