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  5. Sobic.010G220600.1

Sobic.010G220600.1


Description : P1B-type heavy metal cation-transporting ATPase *(HMA)


Gene families : OG_42_0000805 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000805_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G220600.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
PSME_00009776-RA No alias (at1g63440 : 1097.0) The Arabidopsis P-type ATPase HMA5... 0.06 Orthogroups_2024-Update
Potri.001G105800 No alias heavy metal atpase 5 0.02 Orthogroups_2024-Update
Pp1s184_124V6 No alias heavy metal p-type atpase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 59 119
IPR006121 HMA_dom 141 201
No external refs found!