1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G222300.1

Sobic.010G222300.1


Description : Unknown function


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G222300.1
Cluster HCAA Clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61167 No alias BTB-POZ and MATH domain 2 0.04 Orthogroups_2024-Update
Bradi3g18500 No alias BTB-POZ and MATH domain 4 0.04 Orthogroups_2024-Update
Bradi5g22346 No alias BTB-POZ and MATH domain 1 0.03 Orthogroups_2024-Update
Bradi5g22375 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
GRMZM2G027688 No alias BTB-POZ and MATH domain 2 0.04 Orthogroups_2024-Update
GRMZM2G143782 No alias BTB-POZ and MATH domain 1 0.02 Orthogroups_2024-Update
GRMZM2G166049 No alias BTB-POZ and MATH domain 4 0.03 Orthogroups_2024-Update
LOC_Os06g45730 No alias MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
LOC_Os10g29260 No alias speckle-type POZ protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g29740 No alias MBTB55 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
PSME_00004568-RA No alias (at3g03740 : 220.0) BTB-POZ and MATH domain 4 (BPM4);... 0.03 Orthogroups_2024-Update
PSME_00017885-RA No alias (at3g03740 : 169.0) BTB-POZ and MATH domain 4 (BPM4);... 0.02 Orthogroups_2024-Update
Seita.2G373200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G216900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G145900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G198500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G158100.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G082000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G088700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G206550.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.contig_2175.4 No alias (at3g43700 : 92.8) BTB-POZ and MATH domain 6 (BPM6);... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 179 298
No external refs found!