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  5. Sobic.010G225300.2

Sobic.010G225300.2


Description : UBQ ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G225300.2
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
271198 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
A4A49_33897 No alias polyubiquitin 12 0.02 Orthogroups_2024-Update
Brara.E02153.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
LOC_Os01g22490 No alias 40S ribosomal protein S27a, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g53620 No alias ubiquitin family protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_10000516g0010 No alias (at2g47110 : 160.0) polyubiquitin gene; ubiquitin 6... 0.02 Orthogroups_2024-Update
MA_10431748g0020 No alias (at5g03240 : 437.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
MA_5869456g0010 No alias (at5g03240 : 181.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
Mp7g12760.1 No alias component RPS27a of SSU proteome 0.02 Orthogroups_2024-Update
Potri.011G134200 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.4G253400.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.4G259900.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Seita.4G265000.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
evm.model.contig_2285.8 No alias (p00074|cyc_ginbi : 153.0) Cytochrome c - Ginkgo biloba... 0.02 Orthogroups_2024-Update
evm.model.tig00000144.76 No alias (at2g35635 : 253.0) encodes a ubiquitin-like protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 123 194
IPR000626 Ubiquitin_dom 47 118
IPR000626 Ubiquitin_dom 199 270
No external refs found!