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  5. Sobic.010G230000.1

Sobic.010G230000.1


Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G230000.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_21189 No alias l-ascorbate oxidase-like protein 0.03 Orthogroups_2024-Update
At1g41830 No alias SKS6 [Source:UniProtKB/TrEMBL;Acc:A0A178W7S3] 0.02 Orthogroups_2024-Update
Bradi1g32470 No alias SKU5 similar 5 0.05 Orthogroups_2024-Update
HORVU7Hr1G105620.3 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
PSME_00026246-RA No alias (at1g76160 : 713.0) SKU5 similar 5 (sks5); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.002G021000 No alias SKU5 similar 18 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 164 300
IPR011706 Cu-oxidase_2 407 517
IPR011707 Cu-oxidase_3 38 151
No external refs found!