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  5. Sobic.010G234000.1

Sobic.010G234000.1


Description : Unknown function


Gene families : OG_42_0000762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G234000.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
A4A49_18148 No alias calcium-binding protein pbp1 0.07 Orthogroups_2024-Update
A4A49_60364 No alias calcium-binding protein pbp1 0.07 Orthogroups_2024-Update
AC225718.2_FG006 No alias Calcium-binding EF-hand family protein 0.17 Orthogroups_2024-Update
Bradi3g02210 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Brara.C02340.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G062283 No alias pinoid-binding protein 1 0.04 Orthogroups_2024-Update
Glyma.06G258000 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Glyma.07G053300 No alias Calcium-binding EF-hand family protein 0.05 Orthogroups_2024-Update
Glyma.12G142900 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Glyma.13G248200 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.16G022400 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.19G257800 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
LOC_Os06g46950 No alias EF hand family protein, putative, expressed 0.06 Orthogroups_2024-Update
MA_10212526g0010 No alias (at2g46600 : 81.6) Calcium-binding EF-hand family... 0.03 Orthogroups_2024-Update
MA_10375806g0010 No alias (at2g46600 : 129.0) Calcium-binding EF-hand family... 0.05 Orthogroups_2024-Update
MA_1999194g0010 No alias (at2g46600 : 101.0) Calcium-binding EF-hand family... 0.04 Orthogroups_2024-Update
MA_25900g0010 No alias (at2g46600 : 132.0) Calcium-binding EF-hand family... 0.03 Orthogroups_2024-Update
MA_48747g0010 No alias (at2g46600 : 135.0) Calcium-binding EF-hand family... 0.05 Orthogroups_2024-Update
Potri.001G411800 No alias Calcium-binding EF-hand family protein 0.07 Orthogroups_2024-Update
Potri.013G151000 No alias pinoid-binding protein 1 0.03 Orthogroups_2024-Update
Seita.1G107200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc02g079720 No alias Calcium-binding family protein (AHRD V3.3 *** B9I910_POPTR) 0.04 Orthogroups_2024-Update
Solyc07g063690 No alias Calcium-binding family protein (AHRD V3.3 *** B9I910_POPTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 52 103
No external refs found!