Sobic.010G236300.1


Description : ARF-type transcription factor


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G236300.1
Cluster HCAA Clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Brara.A02353.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02033.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G390641 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Glyma.01G103500 No alias auxin response factor 9 0.04 Orthogroups_2024-Update
Glyma.07G130400 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
HORVU1Hr1G087460.6 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os11g32110 No alias auxin response factor, putative, expressed 0.04 Orthogroups_2024-Update
Mp1g12750.1 No alias transcription factor (ARF) 0.02 Orthogroups_2024-Update
Potri.018G063000 No alias auxin response factor 19 0.03 Orthogroups_2024-Update
Seita.1G090900.1 No alias ARF-type transcription factor & auxin signal mediator... 0.04 Orthogroups_2024-Update
Seita.7G108100.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Sopen00g003680 No alias Auxin response factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
CC GO:0005634 nucleus IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
BP GO:0009725 response to hormone IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 229
IPR010525 Auxin_resp 295 378
No external refs found!