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  5. Sobic.010G243400.2

Sobic.010G243400.2


Description : Unknown function


Gene families : OG_42_0000519 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G243400.2
Cluster HCAA Clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
At1g77770 No alias At1g77770 [Source:UniProtKB/TrEMBL;Acc:Q84K51] 0.02 Orthogroups_2024-Update
Bradi1g33380 No alias Protein of unknown function (DUF1644) 0.02 Orthogroups_2024-Update
Bradi3g04050 No alias Protein of unknown function (DUF1644) 0.04 Orthogroups_2024-Update
Bradi4g31851 No alias Protein of unknown function (DUF1644) 0.04 Orthogroups_2024-Update
Brara.B03209.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C02567.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F03305.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.18G173400 No alias Protein of unknown function (DUF1644) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012866 DUF1644 29 189
No external refs found!