1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G246500.1

Sobic.010G246500.1


Description : EC_2.4 glycosyltransferase


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G246500.1
Cluster HCAA Clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
118035 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
At3g23730 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.04 Orthogroups_2024-Update
Brara.D02241.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
GRMZM2G112619 No alias xyloglucan endotransglucosylase/hydrolase 26 0.03 Orthogroups_2024-Update
Glyma.01G196800 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
Glyma.16G150300 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
Glyma.17G065000 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G065200 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G065400 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.19G106700 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
Mp2g18360.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00017520-RA No alias (at4g03210 : 348.0) encodes a member of xyloglucan... 0.02 Orthogroups_2024-Update
Potri.018G084300 No alias xyloglucan endotransglucosylase/hydrolase 26 0.02 Orthogroups_2024-Update
Pp1s410_28V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
Solyc01g099630 No alias xyloglucan endotransglucosylase-hydrolase 1 0.02 Orthogroups_2024-Update
Sopen01g043150 No alias Xyloglucan endo-transglycosylase (XET) C-terminus 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
CC GO:0005618 cell wall IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
BP GO:0006073 cellular glucan metabolic process IEA 16Dec
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA 16Dec
CC GO:0048046 apoplast IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 266 308
IPR000757 GH16 37 216
No external refs found!