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  5. Sobic.010G247900.1

Sobic.010G247900.1


Description : transcriptional co-regulator *(OFP)


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G247900.1
Cluster HCAA Clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Bradi2g22310 No alias ovate family protein 2 0.02 Orthogroups_2024-Update
Bradi3g28000 No alias ovate family protein 1 0.03 Orthogroups_2024-Update
PSME_00042805-RA No alias (at5g19650 : 85.9) ovate family protein 8 (OFP8);... 0.04 Orthogroups_2024-Update
Potri.007G028000 No alias ovate family protein 7 0.03 Orthogroups_2024-Update
Potri.016G072800 No alias Ovate family protein 0.02 Orthogroups_2024-Update
Pp1s65_33V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006458 Ovate_C 118 173
No external refs found!