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  5. Sobic.010G249900.2

Sobic.010G249900.2


Description : abscisic acid perception modulator *(SOAR)


Gene families : OG_42_0009807 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G249900.2
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
A4A49_00290 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.05 Orthogroups_2024-Update
Brara.J02240.1 No alias abscisic acid perception modulator *(SOAR) 0.04 Orthogroups_2024-Update
GRMZM2G107437 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G012070.1 No alias abscisic acid perception modulator *(SOAR) 0.04 Orthogroups_2024-Update
Sopen06g024170 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 365 406
IPR002885 Pentatricopeptide_repeat 287 331
IPR002885 Pentatricopeptide_repeat 182 230
No external refs found!