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  5. Sobic.010G250200.1

Sobic.010G250200.1


Description : aminodeoxychorismate synthase & EC_2.6 transferase transferring nitrogenous group & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0007607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G250200.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Brara.G01405.1 No alias aminodeoxychorismate synthase & EC_2.6 transferase... 0.03 Orthogroups_2024-Update
GRMZM2G416386 No alias para-aminobenzoate (PABA) synthase family protein 0.03 Orthogroups_2024-Update
Glyma.20G179400 No alias para-aminobenzoate (PABA) synthase family protein 0.03 Orthogroups_2024-Update
Kfl00198_0190 kfl00198_0190_v1.1 (at2g28880 : 712.0) embryo defective 1997 (emb1997);... 0.02 Orthogroups_2024-Update
Seita.4G243000.1 No alias aminodeoxychorismate synthase & EC_2.6 transferase... 0.07 Orthogroups_2024-Update
Solyc04g049360 No alias aminodeoxychorismate synthase/glutamine amidotransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR006805 Anth_synth_I_N 381 527
IPR017926 GATASE 54 215
IPR017926 GATASE 248 298
IPR015890 Chorismate_C 593 850
No external refs found!