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  5. Sobic.010G251800.1

Sobic.010G251800.1


Description : Unknown function


Gene families : OG_42_0000454 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G251800.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
A4A49_05712 No alias protein mizu-kussei 1 0.03 Orthogroups_2024-Update
A4A49_36817 No alias protein mizu-kussei 1 0.03 Orthogroups_2024-Update
LOC_Os05g50160 No alias DUF617 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.1G292500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G329100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g114390 No alias MIZU-KUSSEI-like protein (Protein of unknown function,... 0.03 Orthogroups_2024-Update
Solyc04g016060 No alias MIZU-KUSSEI-like protein (Protein of unknown function,... 0.02 Orthogroups_2024-Update
Sopen09g006070 No alias Protein of unknown function, DUF617 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010274 hydrotropism IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR006460 MIZ1-like_pln 89 270
No external refs found!