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  5. Sobic.010G257800.1

Sobic.010G257800.1


Description : EC_5.2 cis-trans-isomerase


Gene families : OG_42_0015690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0015690_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G257800.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Seita.4G274300.1 No alias EC_5.2 cis-trans-isomerase 0.04 Orthogroups_2024-Update
evm.model.contig_4604.1 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA 16Dec
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 47 211
No external refs found!