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  5. Sobic.010G261000.1

Sobic.010G261000.1


Description : pectin methylesterase inhibitor


Gene families : OG_42_0000479 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G261000.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Brara.I01429.1 No alias pectin methylesterase inhibitor 0.03 Orthogroups_2024-Update
Brara.J01550.1 No alias pectin methylesterase inhibitor 0.02 Orthogroups_2024-Update
Glyma.05G236600 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 Orthogroups_2024-Update
Glyma.06G319300 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 Orthogroups_2024-Update
MA_9171445g0010 No alias (at2g01610 : 136.0) Plant invertase/pectin... 0.02 Orthogroups_2024-Update
Potri.008G132600 No alias Plant invertase/pectin methylesterase inhibitor... 0.02 Orthogroups_2024-Update
Solyc06g034370 No alias Plant invertase/pectin methylesterase inhibitor... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 28 194
No external refs found!