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  5. Sobic.010G268500.1

Sobic.010G268500.1


Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G268500.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
438115 No alias laccase 12 0.02 Orthogroups_2024-Update
78404 No alias laccase 12 0.04 Orthogroups_2024-Update
95740 No alias laccase 17 0.03 Orthogroups_2024-Update
At1g18140 No alias Laccase-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMS3] 0.03 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.04 Orthogroups_2024-Update
Brara.E00552.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.J02661.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
MA_897132g0010 No alias (at2g40370 : 560.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00018934-RA No alias (at5g05390 : 747.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00033093-RA No alias (at2g40370 : 637.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.03 Orthogroups_2024-Update
Seita.8G018100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Solyc05g052340 No alias Laccase (AHRD V3.3 *** K4C1R5_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 179 332
IPR011707 Cu-oxidase_3 47 159
IPR011706 Cu-oxidase_2 458 588
No external refs found!