Sobic.010G271501.1


Description : Unknown function


Gene families : OG_42_0003469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G271501.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Seita.1G165300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G285700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G272000.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA 16Dec
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA 16Dec
BP GO:0006887 exocytosis IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!