Description : component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex
Gene families : OG_42_0001824 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001824_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.010G275500.1 | |
Cluster | HCAA Clusters: Cluster_234 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g29690 | No alias | Calcium-binding EF hand family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.04G016600 | No alias | Calcium-binding EF hand family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.06G016700 | No alias | Calcium-binding EF hand family protein | 0.05 | Orthogroups_2024-Update | |
Kfl00218_0010 | kfl00218_0010_v1.1 | (at1g21630 : 119.0) Calcium-binding EF hand family... | 0.02 | Orthogroups_2024-Update | |
Kfl00218_0020 | kfl00218_0020_v1.1 | (at1g21630 : 149.0) Calcium-binding EF hand family... | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g51250 | No alias | EF hand family protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
PSME_00028035-RA | No alias | (at1g20760 : 553.0) Calcium-binding EF hand family... | 0.02 | Orthogroups_2024-Update | |
Pp1s149_18V6 | No alias | calcium ion binding | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | IEA | 16Dec |
MF | GO:0005515 | protein binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
BP | GO:0006476 | protein deacetylation | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016575 | histone deacetylation | IEP | Predicted GO |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
BP | GO:0035601 | protein deacylation | IEP | Predicted GO |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
BP | GO:0098732 | macromolecule deacylation | IEP | Predicted GO |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Predicted GO |
No external refs found! |