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  5. Sobic.010G279450.1

Sobic.010G279450.1


Description : histone demethylase *(KDM5)


Gene families : OG_42_0007370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.010G279450.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Bradi1g29247 No alias transcription factor jumonji (jmjC) domain-containing protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 315 361
IPR019787 Znf_PHD-finger 1764 1808
IPR001606 ARID_dom 91 186
IPR003347 JmjC_dom 486 602
IPR013637 Lys_sp_deMease-like_dom 838 1000
IPR013637 Lys_sp_deMease-like_dom 939 1054
IPR013637 Lys_sp_deMease-like_dom 1276 1471
IPR013637 Lys_sp_deMease-like_dom 1010 1249
IPR004198 Znf_C5HC2 695 745
IPR003349 JmjN 21 54
No external refs found!