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  5. Seita.1G006800.1

Seita.1G006800.1


Description : Unknown function


Gene families : OG_42_0000266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G006800.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Bradi1g28590 No alias receptor like protein 2 0.07 Orthogroups_2024-Update
Bradi3g04227 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi5g25790 No alias phytosulfokin receptor 1 0.04 Orthogroups_2024-Update
Glyma.03G262500 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.12G225800 No alias phytosylfokine-alpha receptor 2 0.04 Orthogroups_2024-Update
HORVU0Hr1G015280.1 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
HORVU2Hr1G120830.2 No alias LRR-Xb protein kinase & pythosulfokine peptide receptor... 0.03 Orthogroups_2024-Update
HORVU6Hr1G024660.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU7Hr1G099520.27 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_103858g0010 No alias (at5g53890 : 942.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
MA_65838g0010 No alias (at5g53890 : 881.0) Encodes a leucine-rich repeat... 0.06 Orthogroups_2024-Update
Seita.1G084100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.J023100.1 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Sobic.004G129201.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g008140 No alias Receptor kinase (AHRD V3.3 *** A0A0K9Q671_ZOSMR) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 32 70
IPR001611 Leu-rich_rpt 444 500
No external refs found!