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Description : cyclic nucleotide-gated cation channel *(CNGC)
Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.1G014300.1 | |
| Cluster | HCAA Clusters: Cluster_202 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os04g55080 | No alias | cyclic nucleotide-gated ion channel, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G317700.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.05 | Orthogroups_2024-Update | |
| Sopen08g022780 | No alias | Ion transport protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Predicted GO |
| BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
| BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
| MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0006887 | exocytosis | IEP | Predicted GO |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Predicted GO |
| BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
| BP | GO:0032259 | methylation | IEP | Predicted GO |
| BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
| BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
| CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
| BP | GO:0046903 | secretion | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
| CC | GO:0099023 | tethering complex | IEP | Predicted GO |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Predicted GO |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000595 | cNMP-bd_dom | 24 | 113 |
| No external refs found! |