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  5. Seita.1G015400.1

Seita.1G015400.1


Description : Unknown function


Gene families : OG_42_0009937 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G015400.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G079600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g33970 No alias VQ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.010G155300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008889 VQ 10 34
No external refs found!