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  5. Seita.1G021500.1

Seita.1G021500.1


Description : transcription factor *(CLAUSA)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G021500.1
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
442062 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
At1g69580 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT1G69580] 0.03 Orthogroups_2024-Update
Bradi1g17400 No alias myb-related protein 1 0.1 Orthogroups_2024-Update
Bradi1g36236 No alias myb-like HTH transcriptional regulator family protein 0.05 Orthogroups_2024-Update
Bradi3g00550 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Bradi3g22290 No alias myb-like HTH transcriptional regulator family protein 0.07 Orthogroups_2024-Update
Bradi5g25320 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Brara.E00559.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Brara.G02892.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G090230 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G106800 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.09G207300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G107500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g20900 No alias Myb transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.004G057900 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Pp1s47_90V6 No alias at3g24120 muj8_3 0.02 Orthogroups_2024-Update
Seita.1G283000.1 No alias KANADI-type transcription factor 0.05 Orthogroups_2024-Update
Seita.1G286400.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Seita.2G118400.1 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Seita.4G266400.1 No alias transcription factor *(CLAUSA) 0.05 Orthogroups_2024-Update
Seita.6G053400.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G078300.1 No alias KANADI-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G519100.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Sobic.006G181600.1 No alias transcription factor *(CLAUSA) 0.05 Orthogroups_2024-Update
Solyc09g091880 No alias Myb family transcription factor APL (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen06g024660 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 127 177
No external refs found!