Description : UDP-L-rhamnose synthase *(RHM)
Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.1G026500.1 | |
Cluster | HCAA Clusters: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g78570 | No alias | Trifunctional UDP-glucose... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G166767 | No alias | rhamnose biosynthesis 1 | 0.04 | Orthogroups_2024-Update | |
Mp1g04880.1 | No alias | UDP-L-rhamnose synthase | 0.03 | Orthogroups_2024-Update | |
PSME_00056062-RA | No alias | (at1g78570 : 1136.0) Encodes a UDP-L-Rhamnose synthase... | 0.04 | Orthogroups_2024-Update | |
Pp1s194_128V6 | No alias | rhamnose synthase | 0.02 | Orthogroups_2024-Update | |
Pp1s263_3V6 | No alias | rhamnose synthase | 0.03 | Orthogroups_2024-Update | |
Sobic.001G418000.2 | No alias | UDP-L-rhamnose synthase *(RHM) | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Predicted GO |
MF | GO:0004668 | protein-arginine deiminase activity | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
BP | GO:0009445 | putrescine metabolic process | IEP | Predicted GO |
BP | GO:0009446 | putrescine biosynthetic process | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016421 | CoA carboxylase activity | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016040 | NAD(P)-bd_dom | 11 | 317 |
No external refs found! |