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  5. Seita.1G040400.1

Seita.1G040400.1


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL)


Gene families : OG_42_0000514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G040400.1
Cluster HCAA Clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
A4A49_14914 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
Brara.E00403.1 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) 0.03 Orthogroups_2024-Update
Glyma.05G155600 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
MA_10507g0010 No alias (at1g80440 : 219.0) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
MA_93338g0010 No alias (at1g80440 : 149.0) Galactose oxidase/kelch repeat... 0.05 Orthogroups_2024-Update
Mp1g25730.1 No alias Putative F-box/kelch-repeat protein At1g27420... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 159 204
IPR006652 Kelch_1 120 156
IPR001810 F-box_dom 7 36
No external refs found!