At4g11140

Description : Ethylene-responsive transcription factor CRF1 [Source:UniProtKB/Swiss-Prot;Acc:O82503]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g11140
Cluster	HCCA clusters: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
A4A49_08495	No alias	ethylene-responsive transcription factor 3	0.02	Orthogroups_2024-Update
A4A49_13998	No alias	ethylene-responsive transcription factor 4	0.02	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.05	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.02	Orthogroups_2024-Update
A4A49_28228	No alias	ethylene-responsive transcription factor erf017	0.02	Orthogroups_2024-Update
A4A49_30015	No alias	ethylene-responsive transcription factor erf019	0.03	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.03	Orthogroups_2024-Update
A4A49_42088	No alias	ethylene-responsive transcription factor 13	0.02	Orthogroups_2024-Update
At1g28360	No alias	Ethylene-responsive transcription factor 12...	0.02	Orthogroups_2024-Update
At1g28370	No alias	ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]	0.03	Orthogroups_2024-Update
At1g63030	No alias	Dehydration-responsive element-binding protein 1E...	0.04	Orthogroups_2024-Update
At2g33710	No alias	Integrase-type DNA-binding superfamily protein...	0.05	Orthogroups_2024-Update
At4g16750	No alias	Ethylene-responsive transcription factor ERF039...	0.04	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.04	Orthogroups_2024-Update
At5g13910	No alias	LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]	0.04	Orthogroups_2024-Update
At5g18560	No alias	PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]	0.03	Orthogroups_2024-Update
At5g47230	No alias	ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]	0.04	Orthogroups_2024-Update
At5g61890	No alias	Ethylene-responsive transcription factor ERF114...	0.02	Orthogroups_2024-Update
Bradi2g21060	No alias	erf domain protein 9	0.04	Orthogroups_2024-Update
Bradi2g50035	No alias	ethylene responsive element binding factor 2	0.03	Orthogroups_2024-Update
Bradi3g06562	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.D02714.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.G00520.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.G02420.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.H01995.1	No alias	subgroup ERF-VIII transcription factor	0.05	Orthogroups_2024-Update
Brara.I00861.1	No alias	subgroup ERF-II-DEAR transcription factor	0.04	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Cre14.g620500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G061487	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
GRMZM2G069082	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
GRMZM2G434203	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.03G112000	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.03G138900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.07G017300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G114000	No alias	ethylene-responsive element binding factor 13	0.05	Orthogroups_2024-Update
Glyma.09G147200	No alias	C-repeat-binding factor 4	0.04	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.11G053600	No alias	DREB and EAR motif protein 2	0.03	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.13G233900	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Glyma.13G236500	No alias	erf domain protein 9	0.04	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G035500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU6Hr1G050500.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.05	Orthogroups_2024-Update
MA_7166g0010	No alias	(at3g60490 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00004941-RA	No alias	(at4g17500 : 94.7) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.06	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.08	Orthogroups_2024-Update
PSME_00037532-RA	No alias	(at5g61890 : 129.0) encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.05	Orthogroups_2024-Update
PSME_00041322-RA	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
PSME_00041851-RA	No alias	(at1g21910 : 102.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
PSME_00050761-RA	No alias	(at1g15360 : 129.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.002G085600	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Potri.003G071666	No alias	related to AP2 12	0.04	Orthogroups_2024-Update
Potri.008G073600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.019G088000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.07	Orthogroups_2024-Update
Pp1s28_144V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s7_472V6	No alias	ap2 erf domain-containing transcription factor	0.06	Orthogroups_2024-Update
Seita.1G351800.1	No alias	subgroup ERF-V transcription factor	0.07	Orthogroups_2024-Update
Seita.2G280400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.5G320400.1	No alias	subgroup ERF-IX transcription factor	0.06	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G350500.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Sobic.003G148600.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.05	Orthogroups_2024-Update
Sobic.004G227400.2	No alias	subgroup ERF-I transcription factor	0.06	Orthogroups_2024-Update
Solyc01g065980	No alias	Ethylene Response Factor E.4	0.03	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.05	Orthogroups_2024-Update
Solyc02g090770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.07	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.04	Orthogroups_2024-Update
Solyc07g042230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0006820	anion transport	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	86	135

External Links

No external refs found!

At4g11140

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation