Description : component *(mS81) of small mitoribosomal-subunit proteome
Gene families : OG_42_0004307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004307_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.1G046200.1 | |
Cluster | HCAA Clusters: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g48250 | No alias | Pentatricopeptide repeat-containing protein At3g48250,... | 0.03 | Orthogroups_2024-Update | |
At5g15980 | No alias | Pentatricopeptide repeat-containing protein At5g15980,... | 0.09 | Orthogroups_2024-Update | |
Bradi3g07350 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.07 | Orthogroups_2024-Update | |
Brara.F02162.1 | No alias | component *(mS81) of small mitoribosomal-subunit proteome | 0.07 | Orthogroups_2024-Update | |
Brara.J01919.1 | No alias | component *(mS81) of small mitoribosomal-subunit proteome | 0.05 | Orthogroups_2024-Update | |
Glyma.18G278400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
HORVU6Hr1G032550.1 | No alias | component *(mS81) of small mitoribosomal-subunit proteome | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g73950 | No alias | PPR repeat containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.015G084800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.11 | Orthogroups_2024-Update | |
Potri.017G108100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Sobic.003G442800.1 | No alias | component *(mS81) of small mitoribosomal-subunit proteome | 0.21 | Orthogroups_2024-Update | |
Sobic.004G082700.1 | No alias | component *(mS81) of small mitoribosomal-subunit proteome | 0.17 | Orthogroups_2024-Update | |
Solyc02g089560 | No alias | Pentatricopeptide repeat (PPR) superfamily protein,... | 0.08 | Orthogroups_2024-Update | |
Solyc03g112190 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.02 | Orthogroups_2024-Update | |
Sopen02g034290 | No alias | PPR repeat | 0.05 | Orthogroups_2024-Update | |
Sopen03g031280 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Predicted GO |
MF | GO:0032977 | membrane insertase activity | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
No external refs found! |