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  5. Seita.1G048400.1

Seita.1G048400.1


Description : Unknown function


Gene families : OG_42_0008313 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G048400.1
Cluster HCAA Clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Brara.E02998.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 181 231
IPR000408 Reg_chr_condens 385 430
IPR000408 Reg_chr_condens 75 123
IPR000408 Reg_chr_condens 127 178
IPR000408 Reg_chr_condens 434 482
No external refs found!