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  5. Seita.1G054000.1

Seita.1G054000.1


Description : EC_2.4 glycosyltransferase & mannan synthase *(CSLA)


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G054000.1
Cluster HCAA Clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
At1g24070 No alias Probable glucomannan 4-beta-mannosyltransferase 10... 0.03 Orthogroups_2024-Update
Bradi4g38970 No alias cellulose synthase-like A3 0.04 Orthogroups_2024-Update
Glyma.13G150700 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G026400 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
Pp1s224_44V6 No alias cellulose synthase-like glycosyltransferase family 2 0.04 Orthogroups_2024-Update
Seita.2G211800.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 177 369
No external refs found!