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  5. Seita.1G054700.1

Seita.1G054700.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G054700.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Bradi1g52440 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.02 Orthogroups_2024-Update
Glyma.14G105900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g26420 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g06770 No alias RING finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g04090 No alias zinc finger, C3HC4 type domain containing protein 0.04 Orthogroups_2024-Update
PSME_00032072-RA No alias (at3g56580 : 108.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G074600.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G199100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g104260 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g008480 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 279 320
No external refs found!