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  5. Seita.1G055700.1

Seita.1G055700.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G055700.1
Cluster HCAA Clusters: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
410515 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
A4A49_00814 No alias abc transporter b family member 4 0.02 Orthogroups_2024-Update
Bradi2g47337 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Bradi2g47410 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Brara.F03055.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Brara.I01830.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Brara.K00467.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Glyma.09G206300 No alias P-glycoprotein 2 0.04 Orthogroups_2024-Update
Glyma.17G041300 No alias ATP binding cassette subfamily B4 0.02 Orthogroups_2024-Update
HORVU2Hr1G001450.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
LOC_Os01g18670 No alias MDR-like ABC transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g35030 No alias MDR-like ABC transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g74470 No alias ABC transporter, ATP-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10431815g0020 No alias (at3g28860 : 1752.0) Belongs to the family of... 0.02 Orthogroups_2024-Update
PSME_00020852-RA No alias (at3g28345 : 1431.0) ABC transporter family protein;... 0.01 Orthogroups_2024-Update
PSME_00023484-RA No alias (at2g36910 : 1766.0) Belongs to the family of... 0.02 Orthogroups_2024-Update
Potri.001G417600 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Potri.002G187500 No alias ATP binding cassette subfamily B4 0.02 Orthogroups_2024-Update
Potri.006G074100 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Potri.011G133800 No alias P-glycoprotein 18 0.04 Orthogroups_2024-Update
Seita.1G145300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.5G283500.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.6G060300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.003G267700.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sobic.003G281400.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.007G042600.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.007G163800.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 384 530
IPR003439 ABC_transporter-like 1020 1168
IPR011527 ABC1_TM_dom 680 949
IPR011527 ABC1_TM_dom 40 307
No external refs found!