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  5. Seita.1G055900.1

Seita.1G055900.1


Description : subgroup ERF-VIII transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G055900.1
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
At4g36900 No alias Ethylene-responsive transcription factor RAP2-10... 0.03 Orthogroups_2024-Update
Brara.B03652.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H01502.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.H02645.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Brara.J00757.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.04 Orthogroups_2024-Update
GRMZM2G156006 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G081100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G112800 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.06G221800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G147500 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G031000 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
Potri.006G069400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Pp1s199_50V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s21_247V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s276_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Solyc12g056590 No alias Ethylene Response Factor D.2 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 15 65
No external refs found!