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  5. Seita.1G065800.1

Seita.1G065800.1


Description : p-coumarate


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G065800.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
171251 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
177393 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
At1g20500 No alias 4-coumarate--CoA ligase-like 4... 0.02 Orthogroups_2024-Update
Bradi1g76280 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
Bradi3g05750 No alias 4-coumarate:CoA ligase 2 0.05 Orthogroups_2024-Update
Bradi3g37300 No alias 4-coumarate:CoA ligase 2 0.08 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.07 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.06 Orthogroups_2024-Update
Brara.E02091.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.H02326.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Brara.H02327.1 No alias OPC-8 0.03 Orthogroups_2024-Update
GRMZM2G055320 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
GRMZM2G122787 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.01G232400 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G089000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G081940.3 No alias OPC-8 0.03 Orthogroups_2024-Update
HORVU6Hr1G030390.2 No alias p-coumarate 0.04 Orthogroups_2024-Update
Kfl00016_0470 kfl00016_0470_v1.1 (p14912|4cl1_petcr : 510.0) 4-coumarate--CoA ligase 1... 0.02 Orthogroups_2024-Update
LOC_Os01g67540 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g46970 No alias AMP-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g04000 No alias AMP-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_103893g0010 No alias (at1g20510 : 417.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
MA_10426159g0010 No alias (at1g20510 : 528.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
MA_10430515g0010 No alias (at1g20510 : 564.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
MA_10432138g0010 No alias (at1g20510 : 477.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.05 Orthogroups_2024-Update
MA_109119g0010 No alias (p31687|4cl2_soybn : 667.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
MA_20580g0050 No alias (at1g20510 : 588.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
MA_4881g0010 No alias (at1g20510 : 253.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
MA_5g0040 No alias (at4g05160 : 362.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
MA_633407g0010 No alias (o24145|4cl1_tobac : 656.0) 4-coumarate--CoA ligase 1... 0.04 Orthogroups_2024-Update
MA_70509g0010 No alias (o24146|4cl2_tobac : 763.0) 4-coumarate--CoA ligase 2... 0.04 Orthogroups_2024-Update
MA_8946476g0010 No alias (at1g62940 : 648.0) encodes an acyl-CoA synthetase, has... 0.03 Orthogroups_2024-Update
PSME_00006384-RA No alias (o24146|4cl2_tobac : 768.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00006443-RA No alias (at1g20510 : 556.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.05 Orthogroups_2024-Update
PSME_00010613-RA No alias (at1g20510 : 572.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00011573-RA No alias (at4g05160 : 636.0) Encodes a peroxisomal protein... 0.05 Orthogroups_2024-Update
PSME_00013808-RA No alias (at1g20510 : 243.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00015568-RA No alias (o24146|4cl2_tobac : 707.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00017730-RA No alias (at1g20510 : 538.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
Potri.017G035100 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
Potri.018G094200 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Pp1s12_59V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Pp1s20_346V6 No alias 4-coumarate: ligase 0.04 Orthogroups_2024-Update
Pp1s325_20V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Seita.6G093400.1 No alias p-coumarate 0.04 Orthogroups_2024-Update
Seita.9G184000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G009600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G062500.1 No alias p-coumarate 0.05 Orthogroups_2024-Update
Sobic.007G089900.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen12g031410 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 461 536
IPR000873 AMP-dep_Synth/Lig 52 452
No external refs found!