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  5. Seita.1G072100.1

Seita.1G072100.1


Description : Unknown function


Gene families : OG_42_0000551 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000551_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G072100.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Bradi1g29352 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Bradi4g25041 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G002920.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G019310.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g37840 No alias resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37270 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Sobic.002G072000.5 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G096201.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 194 340
IPR002182 NB-ARC 424 629
No external refs found!