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  5. Seita.1G078000.1

Seita.1G078000.1


Description : Unknown function


Gene families : OG_42_0003746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G078000.1
Cluster HCAA Clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
A4A49_13117 No alias beach domain-containing protein b 0.03 Orthogroups_2024-Update
At1g58230 No alias binding [Source:TAIR;Acc:AT1G58230] 0.06 Orthogroups_2024-Update
Bradi3g04840 No alias binding 0.08 Orthogroups_2024-Update
Glyma.04G096100 No alias binding 0.09 Orthogroups_2024-Update
Glyma.06G097800 No alias binding 0.07 Orthogroups_2024-Update
Kfl00341_0110 kfl00341_0110_v1.1 (at1g58230 : 1027.0) binding; FUNCTIONS IN: binding;... 0.03 Orthogroups_2024-Update
MA_10434688g0010 No alias (at1g58230 : 1924.0) binding; FUNCTIONS IN: binding;... 0.07 Orthogroups_2024-Update
Mp1g22060.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.05 Orthogroups_2024-Update
Pp1s241_91V6 No alias beach domain-containing protein 0.02 Orthogroups_2024-Update
Pp1s241_92V6 No alias F16M22.7; WD-40 repeat family protein / beige-related... 0.02 Orthogroups_2024-Update
Sobic.004G051200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR031570 DUF4704 1321 1833
IPR000409 BEACH_dom 2570 2846
IPR023362 PH-BEACH_dom 2393 2529
No external refs found!