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  5. Seita.1G082400.1

Seita.1G082400.1


Description : Unknown function


Gene families : OG_42_0000266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G082400.1
Cluster HCAA Clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
At1g17250 No alias RLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WD64] 0.03 Orthogroups_2024-Update
HORVU4Hr1G080720.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G023370.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
LOC_Os02g05950 No alias phytosulfokine receptor precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g06240 No alias phytosulfokine receptor precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00047524-RA No alias (at5g53890 : 899.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
Seita.1G082500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G006100.1 No alias LRR-Xb protein kinase & pythosulfokine peptide receptor... 0.04 Orthogroups_2024-Update
Sobic.004G045200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G129201.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G242000.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 456 515
IPR013210 LRR_N_plant-typ 43 80
IPR001611 Leu-rich_rpt 605 626
IPR001611 Leu-rich_rpt 108 126
No external refs found!