1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G084100.1

Seita.1G084100.1


Description : Unknown function


Gene families : OG_42_0000266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G084100.1

Target Alias Description ECC score Gene Family Method Actions
At1g17250 No alias RLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WD64] 0.03 Orthogroups_2024-Update
Brara.J00880.1 No alias LRR-Xb protein kinase & pythosulfokine peptide receptor... 0.03 Orthogroups_2024-Update
GRMZM2G450937 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
GRMZM2G451007 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G055170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G023210.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G023370.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
HORVU6Hr1G024800.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g05970 No alias phytosulfokine receptor precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g06220 No alias receptor protein kinase-like protein At4g34220... 0.02 Orthogroups_2024-Update
Seita.1G006800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G085300.1 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.01 Orthogroups_2024-Update
Seita.1G085600.1 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.2G001000.1 No alias LRR-Xb protein kinase & pythosulfokine peptide receptor... 0.03 Orthogroups_2024-Update
Seita.6G004900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G045500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G129201.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 471 528
IPR013210 LRR_N_plant-typ 24 61
No external refs found!