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  5. Seita.1G086400.1

Seita.1G086400.1


Description : Unknown function


Gene families : OG_42_0000266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G086400.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Bradi1g59360 No alias phytosylfokine-alpha receptor 2 0.08 Orthogroups_2024-Update
Brara.F01214.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G450937 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G452142 No alias phytosulfokin receptor 1 0.03 Orthogroups_2024-Update
HORVU6Hr1G024800.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g01710 No alias phytosulfokine receptor precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_106360g0010 No alias (at1g34420 : 227.0) leucine-rich repeat transmembrane... 0.02 Orthogroups_2024-Update
PSME_00047524-RA No alias (at5g53890 : 899.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
Seita.1G082600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G085500.1 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.1G085700.1 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.6G004900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 46 85
IPR001611 Leu-rich_rpt 284 324
IPR001611 Leu-rich_rpt 114 130
No external refs found!