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  5. Seita.1G088900.1

Seita.1G088900.1


Description : activating factor *(eIF5) of eIF2-GTP hydrolysis


Gene families : OG_42_0001995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G088900.1
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G165917 No alias Translation initiation factor IF2/IF5 0.03 Orthogroups_2024-Update
Pp1s626_4V6 No alias Eukaryotic translation initiation factor 5 (eIF-5) [Zea mays] 0.02 Orthogroups_2024-Update
Sopen02g035840 No alias Domain found in IF2B/IF5 0.03 Orthogroups_2024-Update
evm.model.contig_3754.1 No alias (at1g77840 : 144.0) Translation initiation factor... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
BP GO:0006413 translational initiation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002735 Transl_init_fac_IF2/IF5 11 127
IPR003307 W2_domain 375 452
No external refs found!