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  5. Seita.1G098300.1

Seita.1G098300.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000439 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G098300.1
Cluster HCAA Clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
74114 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
At3g47040 No alias Glycosyl hydrolase family protein... 0.03 Orthogroups_2024-Update
Brara.F01774.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os03g53790 No alias periplasmic beta-glucosidase precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_41345g0010 No alias (at5g20950 : 814.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
Mp1g11940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Orthogroups_2024-Update
PSME_00032893-RA No alias (at5g20950 : 756.0) Glycosyl hydrolase family protein;... 0.04 Orthogroups_2024-Update
Pp1s217_8V6 No alias glycosyl hydrolase family 3 n terminal domain containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 433 646
IPR001764 Glyco_hydro_3_N 68 396
No external refs found!