Description : E3 ubiquitin ligase *(SINA)
Gene families : OG_42_0000730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000730_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.1G100400.1 | |
Cluster | HCAA Clusters: Cluster_152 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.I04009.1 | No alias | E3 ubiquitin ligase *(SINA) | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g03620 | No alias | seven in absentia protein family domain containing... | 0.02 | Orthogroups_2024-Update | |
Seita.3G083500.1 | No alias | E3 ubiquitin ligase *(SINA) | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | IEA | 16Dec |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | 16Dec |
BP | GO:0007275 | multicellular organism development | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predicted GO |
BP | GO:0006541 | glutamine metabolic process | IEP | Predicted GO |
BP | GO:0006542 | glutamine biosynthetic process | IEP | Predicted GO |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016211 | ammonia ligase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018121 | 7-in-absentia-prot_TRAF-dom | 102 | 301 |
No external refs found! |